If, by chance, the modified virus is better at evading antivirus programs without losing its ability to invade other computers, it will spread through cyberspace. If so, the mutants will survive and reproduce. As time goes by, cyberspace would be full of new viruses that nobody engineered, and that undergo non-organic evolution.
See the Singularity science fiction series, in the third book of which, such a virus does evolve into an emergednt raced of AI.

